//! A repository on disk: the `.oxy` directory, one workspace, the operation
//! log, and the working-copy change (spec §12, §13.1).
//!
//! Not yet implemented from the spec: packs, checkpoints, multiple
//! workspaces, multi-signer policy updates, and the `objects`/`checkpoint`
//! endpoints. A repository without a policy is unverified and accepts
//! unsigned pushes; with one, everything received is checked (spec §14.5). Changes are signed individually when `core.sign` is
//! `change`; the default `seal` leaves them unsigned until push exists.

use crate::attest::{Attest, AttestBody};
use crate::diff::{ranges, split_lines, text_edits};
use crate::hash::{hash_object, ChangeHash, KeyId, ObjectRef, ObjectType};
use crate::identity::{verify as verify_signature, Domain, Identity, SecretKey, Signature};
use crate::ids::{ChangeId, NodeId, WorkspaceId};
use crate::objects::{
    Blob, Change, ChangeKind, Edit, Hlc, Mode, NodeKind, OpRef, StateObject, TreeOp,
};
use crate::oplog::{Format1Op, Op, View, SNAPSHOT_SUFFIX};
use crate::protocol::{
    open_remote, Bundle, RefResult, RefUpdate, RefsResponse, RemoteOptions, RemoteRef,
    SignedAttest, SignedPolicy,
};
use crate::state::{FileContent, Snapshot, State};
use crate::store::{Store, StoreError};
#[allow(unused_imports)]
use crate::subrepo::Pin;
use crate::tree::OpKey;
use rand::RngCore;
use std::collections::{BTreeMap, BTreeSet, HashMap};
use std::fs;
use std::io::Write;
use std::path::{Path, PathBuf};

pub const OXY_DIR: &str = ".oxy";
pub const FORMAT_LINE: &str = "oxy repository format 2\n";
const FORMAT1_LINE: &str = "oxy repository format 1\n";
const BINARY_SNIFF: usize = 8 * 1024;
/// Loose objects tolerated before a commit packs them (spec §13.4).
pub const AUTOPACK_THRESHOLD: usize = 4096;

#[derive(Debug, thiserror::Error)]
pub enum RepoError {
    #[error("io: {0}")]
    Io(#[from] std::io::Error),
    #[error(transparent)]
    Store(#[from] StoreError),
    #[error(transparent)]
    Object(#[from] crate::objects::ObjectError),
    #[error(transparent)]
    State(#[from] crate::state::StateError),
    #[error("{0}")]
    Msg(String),
}

pub type Result<T> = std::result::Result<T, RepoError>;

fn fail<T>(s: impl Into<String>) -> Result<T> {
    Err(RepoError::Msg(s.into()))
}

mod bookmarks;
mod checkout;
mod checkpoint;
mod config;
mod gc;
mod git;
mod history;
mod hooks;
mod identity;
mod inspect;
mod policy;
mod prompt;
mod snapshot;
mod subrepos;
mod sync;
mod tags;
#[cfg(test)]
mod tests;
mod workspace;

pub use bookmarks::{BookmarkInfo, MergeReport};
pub use checkout::CheckoutReport;
pub use config::{parse_size, read_config_file, Config};
pub use gc::GcReport;
pub use git::{GitExportReport, GitImportReport};
pub use hooks::{json_array, json_str, HookOutcome};
pub use identity::{Rotation, SignatureStatus};
pub use inspect::{BisectStep, BlameLine};
pub use policy::PolicyUpdate;
pub use prompt::{PromptInfo, DEFAULT_PROMPT_FORMAT, GLYPH_PROMPT_FORMAT};
pub use snapshot::{
    added_node_paths, diff_files_of, has_conflict_markers, is_binary, referenced_changes,
    render_change, render_hunks, similarity, ChangeStatus, DiffHunk, FileDiff, Hunk, PathStatus,
    Selection, SnapshotResult,
};
pub use subrepos::{SubrepoInfo, SubrepoSync};
pub use sync::{FetchReport, PullReport, PushReport, RefUpdated};
pub use tags::TagInfo;
pub use workspace::{SnapshotLock, WorkspaceInfo};

fn write_atomic(path: &Path, data: &[u8]) -> Result<()> {
    let tmp = path.with_extension("tmp");
    {
        let mut f = fs::File::create(&tmp)?;
        f.write_all(data)?;
        f.sync_all()?;
    }
    fs::rename(&tmp, path)?;
    Ok(())
}

pub struct LogEntry {
    pub hash: ChangeHash,
    /// Metadata from the state; the full change may be absent in a shallow repository.
    pub change: crate::state::ChangeMeta,
    pub is_working_copy: bool,
    pub is_head: bool,
}

/// A file as found on disk or in an imported tree.
pub(crate) struct FsEntry {
    pub kind: NodeKind,
    pub exec: bool,
    /// File content, or a symlink's target. Empty when `blob` is set.
    pub content: Vec<u8>,
    /// The stored blob of an opaque file whose size and mtime are unchanged
    /// since the last manifest (spec §12.3 stat cache); the content was not
    /// read.
    pub blob: Option<ObjectRef>,
    /// BLAKE3 of the content, carried over from the manifest when the stat
    /// is unchanged, so the manifest can be rewritten without rehashing.
    pub content_hash: Option<String>,
}

impl FsEntry {
    pub(crate) fn new(kind: NodeKind, exec: bool, content: Vec<u8>) -> FsEntry {
        FsEntry {
            kind,
            exec,
            content,
            blob: None,
            content_hash: None,
        }
    }
}

pub struct Repo {
    /// Oxygen-pinned subrepos skipped by the running Git export.
    pub(crate) git_export_skipped: std::cell::Cell<usize>,
    root: PathBuf,
    oxy: PathBuf,
    store: Store,
    workspace: WorkspaceId,
    /// A hosted repository with no working copy (spec §12.2, hub spec §4.1).
    bare: bool,
    keys_dir: PathBuf,
    user_config: PathBuf,
    pub config: Config,
}

/// Marker file of a bare repository, inside `.oxy/`.
const BARE_MARKER: &str = "bare";
/// Marker of a hosted repository that has no id yet: the first push binds
/// it to the pusher's id (spec §16.1).
const UNBOUND_MARKER: &str = "unbound";

/// The user's oxy directory: `$OXY_HOME`, else `$XDG_CONFIG_HOME/oxy`, else
/// `~/.config/oxy`. It holds `config.toml` (spec §19) and `keys/`.
pub fn default_home() -> PathBuf {
    if let Ok(h) = std::env::var("OXY_HOME") {
        return PathBuf::from(h);
    }
    if let Ok(x) = std::env::var("XDG_CONFIG_HOME") {
        return PathBuf::from(x).join("oxy");
    }
    let home = std::env::var("HOME").unwrap_or_else(|_| ".".into());
    PathBuf::from(home).join(".config").join("oxy")
}

pub fn default_keys_dir() -> PathBuf {
    default_home().join("keys")
}

pub fn default_user_config() -> PathBuf {
    default_home().join("config.toml")
}

/// Where `create_identity` records the author.
#[derive(Clone, Copy, Debug, PartialEq, Eq)]
pub enum IdentityScope {
    /// The user file: every repository of this user signs with it.
    User,
    /// This repository only.
    Repo,
}

impl Repo {
    // ------------------------------------------------------------ lifecycle

    pub fn init(root: &Path) -> Result<Repo> {
        let mut id = [0u8; 16];
        rand::rngs::OsRng.fill_bytes(&mut id);
        Self::init_with_id(root, id)
    }

    /// Initialize a repository with a given repository ID (clones share the
    /// ID of their origin, spec §14.4).
    pub fn init_with_id(root: &Path, id: [u8; 16]) -> Result<Repo> {
        fs::create_dir_all(root)?;
        let root = root.canonicalize().unwrap_or_else(|_| root.to_path_buf());
        let oxy = root.join(OXY_DIR);
        if oxy.exists() {
            return fail(format!("{} is already an oxy repository", root.display()));
        }
        fs::create_dir_all(oxy.join("ops"))?;
        write_atomic(&oxy.join("format"), FORMAT_LINE.as_bytes())?;
        write_atomic(&oxy.join("id"), hex::encode(id).as_bytes())?;
        let config = Config::load(Some(&default_user_config()), &oxy.join("config"))?;
        config.save(&oxy.join("config"))?;
        let workspace = WorkspaceId::random();
        write_atomic(&oxy.join("workspace"), workspace.to_hex().as_bytes())?;
        let store = Store::open(oxy.join("objects"))?;
        let repo = Repo {
            git_export_skipped: Default::default(),
            root,
            oxy,
            store,
            workspace,
            bare: false,
            keys_dir: default_keys_dir(),
            user_config: default_user_config(),
            config,
        };
        repo.register_workspace(&workspace, &repo.root)?;

        let wc = repo.new_working_copy(vec![], "");
        let wc_hash = repo.store.put_change(&wc)?;
        let mut view = View::default();
        view.bookmarks.insert(
            repo.config.bookmark.clone(),
            repo.store.put_state(&StateObject::new(vec![]))?,
        );
        view.workspaces.insert(workspace, wc_hash);
        repo.record_op(&[], "oxy init", view)?;
        Ok(repo)
    }

    /// Create a bare repository: an object store, operation log and
    /// references with no workspace and no working copy, for hosting
    /// (hub spec §4.1). `root` holds `.oxy/` and nothing else.
    pub fn init_bare(root: &Path) -> Result<Repo> {
        let mut id = [0u8; 16];
        rand::rngs::OsRng.fill_bytes(&mut id);
        Self::init_bare_with_id(root, id)
    }

    pub fn init_bare_with_id(root: &Path, id: [u8; 16]) -> Result<Repo> {
        fs::create_dir_all(root)?;
        let root = root.canonicalize().unwrap_or_else(|_| root.to_path_buf());
        let oxy = root.join(OXY_DIR);
        if oxy.exists() {
            return fail(format!("{} is already an oxy repository", root.display()));
        }
        fs::create_dir_all(oxy.join("ops"))?;
        write_atomic(&oxy.join("format"), FORMAT_LINE.as_bytes())?;
        write_atomic(&oxy.join("id"), hex::encode(id).as_bytes())?;
        write_atomic(&oxy.join(BARE_MARKER), b"")?;
        let config = Config::load(Some(&default_user_config()), &oxy.join("config"))?;
        config.save(&oxy.join("config"))?;
        let store = Store::open(oxy.join("objects"))?;
        let repo = Repo {
            git_export_skipped: Default::default(),
            root,
            oxy,
            store,
            workspace: WorkspaceId::ZERO,
            bare: true,
            keys_dir: default_keys_dir(),
            user_config: default_user_config(),
            config,
        };
        let mut view = View::default();
        view.bookmarks.insert(
            repo.config.bookmark.clone(),
            repo.store.put_state(&StateObject::new(vec![]))?,
        );
        repo.record_op(&[], "oxy init --bare", view)?;
        Ok(repo)
    }

    /// A bare repository with no id yet. Its `id()` is all zero until the
    /// first push binds it (`bind_id`), so an existing repository can be
    /// pushed to a freshly created hosted one and keep its identity.
    pub fn init_bare_unbound(root: &Path) -> Result<Repo> {
        let repo = Self::init_bare_with_id(root, [0; 16])?;
        fs::remove_file(repo.oxy.join("id"))?;
        write_atomic(&repo.oxy.join(UNBOUND_MARKER), b"")?;
        Ok(repo)
    }

    pub fn is_unbound(&self) -> bool {
        self.oxy.join(UNBOUND_MARKER).is_file()
    }

    /// Give an unbound repository its id.
    pub fn bind_id(&self, id: [u8; 16]) -> Result<()> {
        if !self.is_unbound() {
            return fail("this repository already has an id");
        }
        if id == [0; 16] {
            return fail("a repository id cannot be all zero");
        }
        write_atomic(&self.oxy.join("id"), hex::encode(id).as_bytes())?;
        fs::remove_file(self.oxy.join(UNBOUND_MARKER))?;
        Ok(())
    }

    /// Whether this repository has no working copy (`init_bare`).
    pub fn is_bare(&self) -> bool {
        self.bare
    }

    /// Open the repository containing `start` (searching upwards).
    pub fn open(start: &Path) -> Result<Repo> {
        let start = start.canonicalize()?;
        let mut dir: Option<&Path> = Some(&start);
        while let Some(d) = dir {
            let oxy = d.join(OXY_DIR);
            if oxy.is_file() {
                // A secondary workspace (spec §12.2): the file points at the repository.
                let text = fs::read_to_string(&oxy)?;
                let Some((shared, workspace)) = workspace::parse_workspace_file(&text) else {
                    return fail(format!("{} is not a valid workspace file", oxy.display()));
                };
                let format = fs::read_to_string(shared.join("format"))?;
                if format != FORMAT_LINE {
                    return fail(format!("unsupported repository format: {}", format.trim()));
                }
                let config = Config::load(Some(&default_user_config()), &shared.join("config"))?;
                let store = Store::open(shared.join("objects"))?;
                let mut repo = Repo {
                    git_export_skipped: Default::default(),
                    root: d.to_path_buf(),
                    oxy: shared,
                    store,
                    workspace,
                    bare: false,
                    keys_dir: default_keys_dir(),
                    user_config: default_user_config(),
                    config,
                };
                repo.apply_workspace_bookmark();
                return Ok(repo);
            }
            if oxy.is_dir() {
                let format = fs::read_to_string(oxy.join("format"))?;
                let config = Config::load(Some(&default_user_config()), &oxy.join("config"))?;
                let bare = oxy.join(BARE_MARKER).is_file();
                let workspace = if bare {
                    WorkspaceId::ZERO
                } else {
                    WorkspaceId::from_hex(fs::read_to_string(oxy.join("workspace"))?.trim())
                        .ok_or_else(|| RepoError::Msg("corrupt .oxy/workspace".into()))?
                };
                let store = Store::open(oxy.join("objects"))?;
                let mut repo = Repo {
                    git_export_skipped: Default::default(),
                    root: d.to_path_buf(),
                    oxy,
                    store,
                    workspace,
                    bare,
                    keys_dir: default_keys_dir(),
                    user_config: default_user_config(),
                    config,
                };
                if !bare {
                    repo.apply_workspace_bookmark();
                }
                if format == FORMAT1_LINE {
                    repo.migrate_format1()?;
                } else if format != FORMAT_LINE {
                    return fail(format!("unsupported repository format: {}", format.trim()));
                }
                return Ok(repo);
            }
            dir = d.parent();
        }
        fail(format!(
            "no oxy repository found at or above {}",
            start.display()
        ))
    }

    /// Rewrite a format-1 operation log, whose bookmarks were head lists,
    /// into format 2, where each bookmark names a `state` object.
    fn migrate_format1(&self) -> Result<()> {
        let hex = fs::read_to_string(self.oxy.join("ops").join("head"))?;
        let head = ObjectRef::from_hex(hex.trim())
            .ok_or_else(|| RepoError::Msg("corrupt .oxy/ops/head".into()))?;
        // Collect the chain root-first.
        let mut chain: Vec<Format1Op> = Vec::new();
        let mut cur = Some(head);
        while let Some(r) = cur {
            let op = Op::decode_format1(&self.store.get_typed(&r, ObjectType::Op)?)?;
            cur = op.parents.first().copied();
            chain.push(op);
        }
        chain.reverse();
        let mut new_parent: Option<ObjectRef> = None;
        for old in chain {
            let mut view = View::default();
            for (name, heads) in &old.view.bookmarks {
                view.bookmarks.insert(
                    name.clone(),
                    self.store.put_state(&StateObject::new(heads.clone()))?,
                );
            }
            view.workspaces = old.view.workspaces.clone();
            let op = Op {
                parents: new_parent.into_iter().collect(),
                hlc: old.hlc,
                command: old.command,
                view,
            };
            new_parent = Some(self.store.put(ObjectType::Op, &op.encode())?);
        }
        write_atomic(
            &self.oxy.join("ops").join("head"),
            new_parent.unwrap().to_hex().as_bytes(),
        )?;
        write_atomic(&self.oxy.join("format"), FORMAT_LINE.as_bytes())?;
        Ok(())
    }

    /// Pack automatically once many loose objects have accumulated.
    pub(crate) fn maybe_autopack(&self) -> Result<()> {
        if self.store.loose_count()? > AUTOPACK_THRESHOLD {
            self.store.pack_loose()?;
            self.store.merge_packs()?;
        }
        Ok(())
    }

    /// The repository ID (spec §14.4). Repositories made before IDs existed get one on first use.
    pub fn id(&self) -> Result<[u8; 16]> {
        if self.is_unbound() {
            return Ok([0; 16]);
        }
        let path = self.oxy.join("id");
        match fs::read_to_string(&path) {
            Ok(h) => hex::decode(h.trim())
                .ok()
                .and_then(|v| v.try_into().ok())
                .ok_or_else(|| RepoError::Msg("corrupt .oxy/id".into())),
            Err(e) if e.kind() == std::io::ErrorKind::NotFound => {
                let mut id = [0u8; 16];
                rand::rngs::OsRng.fill_bytes(&mut id);
                write_atomic(&path, hex::encode(id).as_bytes())?;
                Ok(id)
            }
            Err(e) => Err(e.into()),
        }
    }

    pub fn root(&self) -> &Path {
        &self.root
    }
    pub fn store(&self) -> &Store {
        &self.store
    }
    pub fn workspace(&self) -> WorkspaceId {
        self.workspace
    }

    /// Use a different user directory for keys and the user config file
    /// (tests, or `$OXY_HOME`). Reloads the effective configuration.
    pub fn with_home(mut self, dir: impl Into<PathBuf>) -> Repo {
        let dir = dir.into();
        self.keys_dir = dir.join("keys");
        self.user_config = dir.join("config.toml");
        if let Ok(c) = Config::load(Some(&self.user_config), &self.oxy.join("config")) {
            self.config = c;
        }
        self.apply_workspace_bookmark();
        self
    }

    /// The workspace's current bookmark (spec §10.1) overrides the
    /// configured default when `oxy bookmark switch` has recorded one.
    fn apply_workspace_bookmark(&mut self) {
        if let Ok(b) = fs::read_to_string(
            self.oxy
                .join("workspaces")
                .join(self.workspace.to_hex())
                .join("bookmark"),
        ) {
            let b = b.trim();
            if !b.is_empty() {
                self.config.bookmark = b.to_string();
            }
        }
    }

    pub fn user_config_path(&self) -> &Path {
        &self.user_config
    }

    /// Set a key in the user file and refresh the effective configuration.
    pub fn set_user_config(&mut self, key: &str, value: &str) -> Result<()> {
        Config::set_user(&self.user_config, key, value)?;
        self.config = Config::load(Some(&self.user_config), &self.oxy.join("config"))?;
        Ok(())
    }

    pub fn save_config(&self) -> Result<()> {
        self.config.save(&self.oxy.join("config"))
    }

    fn author(&self) -> KeyId {
        self.config.author_key.unwrap_or(ObjectRef::ZERO)
    }
}

impl Repo {
    fn new_working_copy(&self, deps: Vec<ChangeHash>, message: &str) -> Change {
        let mut c = Change {
            change_id: ChangeId::random(),
            deps,
            author: self.author(),
            hlc: Hlc::now(),
            message: message.into(),
            tree_ops: vec![],
            edits: vec![],
            kind: ChangeKind::WorkingCopy,
        };
        c.normalize();
        c
    }

    // ------------------------------------------------------------ operation log

    pub fn head_op(&self) -> Result<(ObjectRef, Op)> {
        let hex = fs::read_to_string(self.oxy.join("ops").join("head"))?;
        let r = ObjectRef::from_hex(hex.trim())
            .ok_or_else(|| RepoError::Msg("corrupt .oxy/ops/head".into()))?;
        let op = Op::decode(&self.store.get_typed(&r, ObjectType::Op)?)?;
        Ok((r, op))
    }

    pub fn view(&self) -> Result<View> {
        Ok(self.head_op()?.1.view)
    }

    fn record_op(&self, parents: &[ObjectRef], command: &str, view: View) -> Result<ObjectRef> {
        let op = Op {
            parents: parents.to_vec(),
            hlc: Hlc::now(),
            command: command.into(),
            view,
        };
        let r = self.store.put(ObjectType::Op, &op.encode())?;
        write_atomic(&self.oxy.join("ops").join("head"), r.to_hex().as_bytes())?;
        Ok(r)
    }

    pub fn op_log(&self) -> Result<Vec<(ObjectRef, Op)>> {
        let mut out = Vec::new();
        let (mut r, mut op) = self.head_op()?;
        loop {
            let next = op.parents.first().copied();
            out.push((r, op));
            match next {
                Some(p) => {
                    r = p;
                    op = Op::decode(&self.store.get_typed(&r, ObjectType::Op)?)?;
                }
                None => break,
            }
        }
        Ok(out)
    }

    /// Undo the last user command (spec §12.1). Operations that only recorded
    /// a working-copy snapshot are skipped, since the files are still on disk
    /// and the next snapshot recreates them.
    pub fn undo(&self) -> Result<Op> {
        let (_, mut op) = self.head_op()?;
        while op.is_snapshot() {
            let Some(parent) = op.parents.first() else {
                break;
            };
            op = Op::decode(&self.store.get_typed(parent, ObjectType::Op)?)?;
        }
        let Some(parent) = op.parents.first() else {
            return fail("nothing to undo");
        };
        let parent_op = Op::decode(&self.store.get_typed(parent, ObjectType::Op)?)?;
        write_atomic(
            &self.oxy.join("ops").join("head"),
            parent.to_hex().as_bytes(),
        )?;
        self.drop_manifest();
        Ok(parent_op)
    }

    /// The last operation that was not a snapshot.
    pub fn last_command(&self) -> Result<Op> {
        let (_, mut op) = self.head_op()?;
        while op.is_snapshot() {
            let Some(parent) = op.parents.first() else {
                break;
            };
            op = Op::decode(&self.store.get_typed(parent, ObjectType::Op)?)?;
        }
        Ok(op)
    }

    // ------------------------------------------------------------ states

    /// Load the dependency closure of `heads`, through a checkpoint when one applies.
    pub fn load_state(&self, heads: &[ChangeHash]) -> Result<State> {
        if let Some(st) = self.load_state_checkpointed(heads)? {
            return Ok(st);
        }
        self.load_state_full(heads)
    }

    /// Load the dependency closure of `heads` change by change.
    pub fn load_state_full(&self, heads: &[ChangeHash]) -> Result<State> {
        let mut state = State::new();
        let mut stack: Vec<ChangeHash> = heads.to_vec();
        let mut seen: BTreeSet<ChangeHash> = BTreeSet::new();
        while let Some(h) = stack.pop() {
            if !seen.insert(h) {
                continue;
            }
            let c = self.store.get_change(&h)?;
            stack.extend(c.deps.iter().copied());
            state.add_unchecked(c);
        }
        state.validate()?;
        Ok(state)
    }

    pub fn working_copy(&self) -> Result<(ChangeHash, Change)> {
        if self.bare {
            return fail("this is a bare repository: it has no working copy");
        }
        let view = self.view()?;
        let h = *view
            .workspaces
            .get(&self.workspace)
            .ok_or_else(|| RepoError::Msg("this workspace is not in the current view".into()))?;
        Ok((h, self.store.get_change(&h)?))
    }

    /// Heads of a bookmark's state (spec §10.1).
    pub fn heads_of(&self, view: &View, bookmark: &str) -> Result<Vec<ChangeHash>> {
        match view.bookmarks.get(bookmark) {
            Some(st) => Ok(self.store.get_state(st)?.heads),
            None => Ok(vec![]),
        }
    }

    pub fn bookmark_heads(&self) -> Result<Vec<ChangeHash>> {
        self.heads_of(&self.view()?, &self.config.bookmark)
    }

    // ------------------------------------------------------------ blobs

    fn blob_for(content: &[u8]) -> Blob {
        Blob {
            length: content.len() as u64,
            chunks: crate::chunk::chunks(content)
                .into_iter()
                .map(|c| hash_object(ObjectType::Chunk, c))
                .collect(),
        }
    }

    pub fn blob_ref(content: &[u8]) -> ObjectRef {
        Self::blob_for(content).hash()
    }

    pub fn store_blob(&self, content: &[u8]) -> Result<ObjectRef> {
        for c in crate::chunk::chunks(content) {
            self.store.put_chunk(c)?;
        }
        Ok(self
            .store
            .put(ObjectType::Blob, &Self::blob_for(content).encode())?)
    }

    /// Read a blob's content, fetching it from the remote that withheld it
    /// when it is lazily absent (spec §13.5).
    pub fn read_blob(&self, r: &ObjectRef) -> Result<Vec<u8>> {
        if !self.store.has(r) && self.lazy_remote(r).is_some() {
            self.fetch_lazy_blob(r)?;
        }
        let blob = Blob::decode(&self.store.get_typed(r, ObjectType::Blob)?)?;
        let mut out = Vec::with_capacity(blob.length as usize);
        for c in &blob.chunks {
            out.extend(self.store.get_typed(c, ObjectType::Chunk)?);
        }
        Ok(out)
    }

    // ------------------------------------------------------------ working copy

    /// Attributes from the `.oxyattributes` files in the working directory.
    pub fn disk_attributes(&self) -> crate::attributes::Attributes {
        let mut files: Vec<(String, Vec<u8>)> = Vec::new();
        if let Ok(b) = fs::read(self.root.join(".oxyattributes")) {
            files.push((".oxyattributes".into(), b));
        }
        let mut wb = ignore::WalkBuilder::new(&self.root);
        wb.hidden(false)
            .git_ignore(false)
            .git_global(false)
            .git_exclude(false)
            .require_git(false)
            .follow_links(false)
            .add_custom_ignore_filename(".oxyignore");
        wb.filter_entry(|e| e.file_name() != OXY_DIR);
        for entry in wb.build().flatten() {
            if entry.file_name() == ".oxyattributes"
                && entry.path() != self.root.join(".oxyattributes")
            {
                if let Ok(b) = fs::read(entry.path()) {
                    let rel: String = entry
                        .path()
                        .strip_prefix(&self.root)
                        .unwrap()
                        .components()
                        .map(|c| c.as_os_str().to_string_lossy().to_string())
                        .collect::<Vec<_>>()
                        .join("/");
                    files.push((rel, b));
                }
            }
        }
        crate::attributes::Attributes::from_files(
            files.iter().map(|(p, c)| (p.as_str(), c.as_slice())),
        )
    }

    /// Attributes from a materialized state's `.oxyattributes` files.
    pub fn state_attributes(snapshot: &Snapshot) -> crate::attributes::Attributes {
        crate::attributes::Attributes::from_files(snapshot.files.iter().filter_map(|(p, f)| {
            match &f.content {
                FileContent::Text { bytes, .. }
                    if p == ".oxyattributes" || p.ends_with("/.oxyattributes") =>
                {
                    Some((p.as_str(), bytes.as_slice()))
                }
                _ => None,
            }
        }))
    }

    /// Store a blob, raw when the path is `nocompress`.
    pub fn store_blob_for(&self, content: &[u8], nocompress: bool) -> Result<ObjectRef> {
        if !nocompress {
            return self.store_blob(content);
        }
        for c in crate::chunk::chunks(content) {
            self.store.put_chunk_nocompress(c)?;
        }
        Ok(self
            .store
            .put(ObjectType::Blob, &Self::blob_for(content).encode())?)
    }

    fn locks_dir(&self) -> PathBuf {
        self.oxy.join("locks")
    }

    /// Whether `path` is locked locally for editing (spec §18, advisory).
    pub fn is_locked(&self, path: &str) -> bool {
        self.locks_dir().join(path.replace('/', "%2F")).exists()
    }

    /// Take the advisory local lock on a `lockable` file and make it writable.
    pub fn lock_path(&self, path: &str) -> Result<()> {
        let attrs = self.disk_attributes();
        if !attrs.lookup(path).lockable {
            return fail(format!("{path} is not marked lockable in .oxyattributes"));
        }
        fs::create_dir_all(self.locks_dir())?;
        write_atomic(
            &self.locks_dir().join(path.replace('/', "%2F")),
            std::process::id().to_string().as_bytes(),
        )?;
        set_readonly(&self.root.join(path), false)?;
        Ok(())
    }

    /// Release the local lock and make the file read-only again.
    pub fn unlock_path(&self, path: &str) -> Result<()> {
        let _ = fs::remove_file(self.locks_dir().join(path.replace('/', "%2F")));
        if self.root.join(path).exists() {
            set_readonly(&self.root.join(path), true)?;
        }
        Ok(())
    }

    /// Whether a repository path is inside the sparse filter (spec §17).
    pub fn in_scope(&self, path: &str) -> bool {
        self.config.sparse_paths.is_empty()
            || self
                .config
                .sparse_paths
                .iter()
                .any(|p| path == p || path.starts_with(&format!("{p}/")))
    }

    fn walk_working_copy(&self) -> Result<BTreeMap<String, FsEntry>> {
        self.walk_working_copy_with(None, &BTreeMap::new())
    }

    /// A walker over the working copy that never enters a nested repository
    /// (a directory below the root holding `.oxy` or `.git`); the directories
    /// it skipped are collected into `nested`.
    pub(crate) fn walker(
        &self,
        nested: &std::sync::Arc<std::sync::Mutex<Vec<PathBuf>>>,
    ) -> ignore::WalkBuilder {
        let mut wb = ignore::WalkBuilder::new(&self.root);
        wb.hidden(false)
            .git_ignore(false)
            .git_global(false)
            .git_exclude(false)
            .require_git(false)
            .follow_links(false)
            .add_custom_ignore_filename(".oxyignore");
        let nested = nested.clone();
        wb.filter_entry(move |e| {
            if e.file_name() == OXY_DIR {
                return false;
            }
            if e.depth() > 0
                && e.file_type().is_some_and(|t| t.is_dir())
                && (e.path().join(OXY_DIR).exists() || e.path().join(".git").exists())
            {
                nested.lock().unwrap().push(e.path().to_path_buf());
                return false;
            }
            true
        });
        wb
    }

    /// Walk the working copy; with a manifest, a file whose size and mtime
    /// match it is not read: an opaque file yields its known blob, a text
    /// file is read but keeps its known hash. Files modified within two
    /// seconds of the manifest are never trusted (a racy stat).
    ///
    /// `.oxyignore` applies to untracked paths only: every path in `tracked`
    /// (the base state's files) that exists on disk is included even when
    /// an ignore rule matches it, as in Git.
    fn walk_working_copy_with(
        &self,
        cache: Option<&prompt::Manifest>,
        tracked: &BTreeMap<String, (NodeKind, Option<ObjectRef>)>,
    ) -> Result<BTreeMap<String, FsEntry>> {
        let nested = std::sync::Arc::new(std::sync::Mutex::new(Vec::new()));
        let wb = self.walker(&nested);
        let mut out = BTreeMap::new();
        for entry in wb.build() {
            let entry = entry.map_err(|e| RepoError::Msg(e.to_string()))?;
            let path = entry.path();
            if path == self.root {
                continue;
            }
            let rel = path.strip_prefix(&self.root).unwrap();
            let rel: String = rel
                .components()
                .map(|c| c.as_os_str().to_string_lossy().to_string())
                .collect::<Vec<_>>()
                .join("/");
            let Some(ft) = entry.file_type() else {
                continue;
            };
            if ft.is_dir() || !self.in_scope(&rel) {
                continue;
            }
            if ft.is_symlink() {
                let target = fs::read_link(path)?;
                out.insert(
                    rel,
                    FsEntry::new(
                        NodeKind::Symlink,
                        false,
                        target.to_string_lossy().as_bytes().to_vec(),
                    ),
                );
            } else if ft.is_file() {
                let meta = entry
                    .metadata()
                    .map_err(|e| RepoError::Msg(e.to_string()))?;
                let e = self.file_entry(&rel, path, &meta, cache)?;
                out.insert(rel, e);
            }
        }
        // Nested repositories (spec §7.8): registered in `.oxymodules` or
        // already tracked as subrepo nodes, they contribute their pin;
        // unregistered ones are left alone.
        let modules = self.modules_on_disk();
        let removed = self.removed_subrepos();
        for rel in &removed {
            if tracked.get(rel).map(|(k, _)| *k) != Some(NodeKind::Subrepo) {
                self.clear_removed_subrepo(rel);
            }
        }
        let nested_dirs = std::mem::take(&mut *nested.lock().unwrap());
        for dir in nested_dirs {
            let rel = self.rel_path(&dir);
            if !self.in_scope(&rel) || removed.contains(&rel) {
                continue;
            }
            let registered = modules.entries.get(&rel);
            if registered.is_none() && tracked.get(&rel).map(|(k, _)| *k) != Some(NodeKind::Subrepo)
            {
                continue;
            }
            let pin = subrepos::read_pin(&dir, registered.and_then(|m| m.bookmark.as_deref()))?;
            out.insert(rel, FsEntry::new(NodeKind::Subrepo, false, pin.encode()));
        }
        // Tracked paths the ignore rules hid.
        for (rel, (kind, blob)) in tracked {
            if out.contains_key(rel) || !self.in_scope(rel) {
                continue;
            }
            let path = self.root.join(rel);
            if *kind == NodeKind::Subrepo {
                if removed.contains(rel) {
                    continue;
                }
                let present =
                    path.is_dir() && (path.join(OXY_DIR).exists() || path.join(".git").exists());
                if present {
                    let pin = subrepos::read_pin(
                        &path,
                        modules.entries.get(rel).and_then(|m| m.bookmark.as_deref()),
                    )?;
                    out.insert(
                        rel.clone(),
                        FsEntry::new(NodeKind::Subrepo, false, pin.encode()),
                    );
                } else if let Some(b) = blob {
                    // Not cloned (or emptied): the pin stays as recorded, as a
                    // Git gitlink does when its directory is absent.
                    out.insert(
                        rel.clone(),
                        FsEntry {
                            kind: NodeKind::Subrepo,
                            exec: false,
                            content: vec![],
                            blob: Some(*b),
                            content_hash: None,
                        },
                    );
                }
                continue;
            }
            let Ok(meta) = fs::symlink_metadata(&path) else {
                continue;
            };
            let ft = meta.file_type();
            if ft.is_symlink() {
                let target = fs::read_link(&path)?;
                out.insert(
                    rel.clone(),
                    FsEntry::new(
                        NodeKind::Symlink,
                        false,
                        target.to_string_lossy().as_bytes().to_vec(),
                    ),
                );
            } else if ft.is_file() {
                let e = self.file_entry(rel, &path, &meta, cache)?;
                out.insert(rel.clone(), e);
            }
        }
        Ok(out)
    }

    /// The entry for one regular file, read or served from the stat cache.
    fn file_entry(
        &self,
        rel: &str,
        path: &Path,
        meta: &fs::Metadata,
        cache: Option<&prompt::Manifest>,
    ) -> Result<FsEntry> {
        let exec = is_executable(meta);
        let cached = cache.and_then(|m| {
            let e = m.entries.get(rel)?;
            let mtime_ns = prompt::mtime_ns(meta);
            let racy = mtime_ns + 2_000_000_000 >= m.written_ns;
            (e.size == meta.len() && e.mtime_ns == mtime_ns && !racy).then_some(e)
        });
        Ok(match cached {
            Some(e) if e.blob.is_some_and(|b| self.store.has(&b)) => FsEntry {
                kind: NodeKind::File,
                exec,
                content: vec![],
                blob: e.blob,
                content_hash: Some(e.hash.clone()),
            },
            Some(e) => FsEntry {
                kind: NodeKind::File,
                exec,
                content: fs::read(path)?,
                blob: None,
                content_hash: Some(e.hash.clone()),
            },
            None => FsEntry::new(NodeKind::File, exec, fs::read(path)?),
        })
    }

    /// The non-directory paths of a snapshot with their kinds, for the
    /// walker's `tracked` set.
    pub(crate) fn tracked_kinds(
        snapshot: &Snapshot,
    ) -> BTreeMap<String, (NodeKind, Option<ObjectRef>)> {
        snapshot
            .files
            .iter()
            .filter(|(_, f)| f.kind != NodeKind::Dir)
            .map(|(p, f)| {
                let blob = match &f.content {
                    FileContent::Opaque { blobs } => blobs.first().copied(),
                    _ => None,
                };
                (p.clone(), (f.kind, blob))
            })
            .collect()
    }

    /// A path under the root as a `/`-separated relative string.
    pub(crate) fn rel_path(&self, path: &Path) -> String {
        path.strip_prefix(&self.root)
            .unwrap_or(path)
            .components()
            .map(|c| c.as_os_str().to_string_lossy().to_string())
            .collect::<Vec<_>>()
            .join("/")
    }
}

impl Repo {
    /// Changes reachable from the bookmark and the working copy, newest first.
    pub fn log(&self) -> Result<Vec<LogEntry>> {
        let heads = self.bookmark_heads()?;
        if self.bare {
            return self.log_state(&heads);
        }
        let (wc_hash, _) = self.working_copy()?;
        let mut all = heads.clone();
        all.push(wc_hash);
        let state = self.load_state(&all)?;
        let head_set: BTreeSet<ChangeHash> = heads.into_iter().collect();
        let mut entries: Vec<LogEntry> = Vec::new();
        for (h, meta) in state.changes() {
            entries.push(LogEntry {
                hash: *h,
                change: meta.clone(),
                is_working_copy: *h == wc_hash,
                is_head: head_set.contains(h),
            });
        }
        entries.sort_by(|a, b| {
            b.is_working_copy
                .cmp(&a.is_working_copy)
                .then(b.change.hlc.cmp(&a.change.hlc))
                .then(b.hash.cmp(&a.hash))
        });
        Ok(entries)
    }

    /// The log of the state with these heads, newest first, with no working
    /// copy involved (for hosted repositories and any explicit state).
    pub fn log_state(&self, heads: &[ChangeHash]) -> Result<Vec<LogEntry>> {
        let state = self.load_state(heads)?;
        let head_set: BTreeSet<ChangeHash> = state.heads().into_iter().collect();
        let mut entries: Vec<LogEntry> = state
            .changes()
            .map(|(h, meta)| LogEntry {
                hash: *h,
                change: meta.clone(),
                is_working_copy: false,
                is_head: head_set.contains(h),
            })
            .collect();
        entries.sort_by(|a, b| b.change.hlc.cmp(&a.change.hlc).then(b.hash.cmp(&a.hash)));
        Ok(entries)
    }

    /// Resolve a spec to a set of heads: a tag name, the current bookmark's
    /// name, or a single change (`resolve_change`).
    pub fn resolve_heads(&self, spec: &str) -> Result<Vec<ChangeHash>> {
        let view = self.view()?;
        if let Some(st) = view.bookmarks.get(spec) {
            return Ok(self.store.get_state(st)?.heads);
        }
        if let Some(heads) = self.tag_heads(spec)? {
            return Ok(heads);
        }
        Ok(vec![self.resolve_change(spec)?])
    }

    /// Resolve a change by ChangeId prefix, `#hash` prefix, `@` (working copy), or bookmark.
    pub fn resolve_change(&self, spec: &str) -> Result<ChangeHash> {
        if spec == "@" {
            return Ok(self.working_copy()?.0);
        }
        if let Some(st) = self.view()?.bookmarks.get(spec) {
            let heads = self.store.get_state(st)?.heads;
            return match heads.len() {
                1 => Ok(heads[0]),
                n => fail(format!("bookmark {spec} has {n} heads; name a change, or use it where a state is expected")),
            };
        }
        if spec.is_empty() || spec == "#" {
            return fail("empty change specifier");
        }
        let entries = self.log()?;
        let matches: Vec<&LogEntry> = if let Some(hp) = spec.strip_prefix('#') {
            entries
                .iter()
                .filter(|e| e.hash.starts_with_hex(hp))
                .collect()
        } else {
            entries
                .iter()
                .filter(|e| e.change.change_id.starts_with_hex(spec))
                .collect()
        };
        match matches.len() {
            1 => Ok(matches[0].hash),
            0 => fail(format!("no change matches {spec:?}")),
            _ => {
                let ids: BTreeSet<ChangeId> = matches.iter().map(|e| e.change.change_id).collect();
                if ids.len() == 1 {
                    fail(format!(
                        "change {spec} is divergent: {} variants",
                        matches.len()
                    ))
                } else {
                    fail(format!("{spec:?} is ambiguous"))
                }
            }
        }
    }

    /// Human-readable description of what a change does, with line content.
    pub fn describe_change(&self, hash: &ChangeHash) -> Result<String> {
        let change = self.store.get_change(hash)?;
        let base = self.load_state(&change.deps)?;
        let base_snapshot = base.materialize();
        Ok(render_change(&change, &base, &base_snapshot))
    }
}

fn remove_any(path: &Path) -> std::io::Result<()> {
    let m = fs::symlink_metadata(path)?;
    if m.is_dir() {
        fs::remove_dir_all(path)
    } else {
        fs::remove_file(path)
    }
}

fn set_readonly(path: &Path, readonly: bool) -> std::io::Result<()> {
    let mut perms = fs::metadata(path)?.permissions();
    perms.set_readonly(readonly);
    fs::set_permissions(path, perms)
}

#[cfg(unix)]
fn set_executable(path: &Path, exec: bool) -> std::io::Result<()> {
    use std::os::unix::fs::PermissionsExt;
    let mut perms = fs::metadata(path)?.permissions();
    let mode = perms.mode();
    let want = if exec { mode | 0o111 } else { mode & !0o111 };
    if want != mode {
        perms.set_mode(want);
        fs::set_permissions(path, perms)?;
    }
    Ok(())
}
#[cfg(not(unix))]
fn set_executable(_path: &Path, _exec: bool) -> std::io::Result<()> {
    Ok(())
}

#[cfg(unix)]
fn is_executable(m: &fs::Metadata) -> bool {
    use std::os::unix::fs::PermissionsExt;
    m.permissions().mode() & 0o111 != 0
}
#[cfg(not(unix))]
fn is_executable(_m: &fs::Metadata) -> bool {
    false
}

fn op_ref(k: OpKey) -> OpRef {
    OpRef {
        change: k.0,
        index: k.1,
    }
}

fn split_path(path: &str) -> (&str, &str) {
    match path.rfind('/') {
        Some(i) => (&path[..i], &path[i + 1..]),
        None => ("", path),
    }
}